코로나19 이후, 즉 포스트 코로나(Post COVID-19) 시대의 세상은 지금과 완전히 다를 것입니다. 이미 각 국가의 고강도 사회적 거리두기 정책으로 인해 보금자리였던 집이 또 하나의 업무 공간으로 탈바꿈하였으며, 오프라인 사회에서 온라인 사회로, 나아가 디지털 사회로 전환하는 발판을 만들어 주었습니다.

corona

소위 뉴-노멀이라는 새로운 세상에서 IT는 지금보다 더 큰 역할을 할 것으로 예상됩니다. 언택트(Untact) 문화의 확산, 온라인 소비의 증가, 온라인 교육 등의 생활이 일상화되는 움직임은 국가 간 경계를 뒤로 한 채 전 세계적인 디지털 전환을 가속화할 것이기 때문입니다.

언제 어느 순간 나타날지도 모르는, 어쩌면 이미 다가와 있는 상상 가능한 미래에 사전적으로 대비하기 위해서는 전세계의 많은 IT 기술자들이 정보를 공유하고 다양한 방식으로 참여하고 있습니다.

corona literature and study reports

COVID-19 SARS-CoV-2 preprints from medRxiv and bioRxiv (json file)

https://connect.medrxiv.org/relate/content/181

Elsevier articles (xml or pdf file)

https://www.elsevier.com/connect/coronavirus-information-center

WHO database of COVID-19 publications

https://www.who.int/emergencies/diseases/novel-coronavirus-2019/global-research-on-novel-coronavirus-2019-ncov

CORD-19 dataset (biorxiv, medrxiv, Elsevier and other sources)

https://pages.semanticscholar.org/coronavirus-research

Wiley

https://novel-coronavirus.onlinelibrary.wiley.com

Curated sets and databases

Cochrane

https://covid-19.cochrane.org

CORD-19 data set

over 50000 scholarly articles, many with full text, about COVID-19, SARS-CoV-2, and related coronaviruses

https://pages.semanticscholar.org/coronavirus-research

CORD-19 Annotations

https://github.com/SciBiteLabs/CORD19

https://github.com/fhircat/CORD-19-on-FHIR

https://github.com/fhircat/CORD-19-on-FHIR/wiki/CORD-19-Semantic-Annotation-Projects

Miso COVID-19 paper set

https://docs.google.com/spreadsheets/d/1c6M0XmvSaRfA56AtgUc1j6ECXD-B2bva4vON7JD18ho/edit#gid=1440796014

LitCOVID

Curated database of COVID-19 literature from NIH

https://www.ncbi.nlm.nih.gov/research/coronavirus

https://asm.org/COVID/COVID-19-Research-Registry/Home

Twitter datasets

https://zenodo.org/record/3738018#.Xp7jQyNS-Mo

https://www.kaggle.com/smid80/coronavirus-covid19-tweets

https://github.com/echen102/COVID-19-TweetIDs

Lists of publishers which make their content available

http://libguides.lub.lu.se/c.php?g=297899&p=4838427

https://coronavirustechhandbook.com/self-reporting

https://github.com/Co-Epi

Clinical trials and pharmacovigilance

EU Clinical Trials Register - trials related to COVID-19

https://www.clinicaltrialsregister.eu/ctr-search/search?query=covid-19&page=2

Clinicaltrial.gov

https://clinicaltrials.gov

Cochrane Central Register of Controlled Trials (CENTRAL)

https://leoss.net/statistics

International Clinical Trials Registry Portal

lists COVID-19 trials

http://apps.who.int/trialsearch/AdvSearch.aspx?SearchTermStat=117&ReturnUrl=~/ListBy.aspx?TypeListing=0

The European Union electronic Register of Post-Authorisation Studies (EU PAS Register)

http://www.encepp.eu/encepp/studiesDatabase.jsp

https://lif.se/forskningsoversikt-coronavirus

https://www.covid-trials.org

knowledge graphs

COVID graph

https://covidgraph.org

https://github.com/covidgraph/documentation/wiki

KG-COVID-19

https://github.com/Knowledge-Graph-Hub/kg-covid-19/wiki

corona data, tools and other resources

Ourworldindata

https://ourworldindata.org/coronavirus

ELIXIR Covid-19 portal

https://www.covid19dataportal.org

CDC Research Guide on COVID-19

https://www.cdc.gov/library/researchguides/2019NovelCoronavirus.html

Johns Hopkins dashboard of COVID-19 cases

https://www.arcgis.com/apps/opsdashboard/index.html#/bda7594740fd40299423467b48e9ecf6

Johns Hopkins dataset of global COVID-19 cases

https://github.com/CSSEGISandData/COVID-19 and https://www.kaggle.com/sudalairajkumar/novel-corona-virus-2019-dataset

ECDC dataset of global COVID-19 cases

https://www.ecdc.europa.eu/en/publications-data

WHO COVID-19 database

https://www.who.int/emergencies/diseases/novel-coronavirus-2019/global-research-on-novel-coronavirus-2019-ncov

Italy’s data

https://github.com/pcm-dpc/COVID-19

Swedish intensive care register

https://www.icuregswe.org/data–resultat/covid-19-i-svensk-intensivvard

Iceland data

https://www.covid.is/data

Elsevier corona virus page

https://www.elsevier.com/connect/coronavirus-information-center

https://covid19.healthdata.org/

Kaggle

has lots of COVID-19 related datasets, notebooks, discussions

https://www.kaggle.com

COVID19 data on Harvard Dataverse

https://dataverse.harvard.edu/dataverse/covid19

Dimensions COIVD-19 database

lists publications, clinical trials, datasets

https://docs.google.com/spreadsheets/d/1-kTZJZ1GAhJ2m4GAIhw1ZdlgO46JpvX0ZQa232VWRmw/edit#gid=2034285255

Microsoft COVID-19 resources

https://www.microsoft.com/en-us/research/project/academic/articles/microsoft-academic-resources-and-their-application-to-covid-19-research

https://www.lif.se/forskningsoversikt-coronavirus

https://github.com/Co-Epi

EMBL-EBI COVID-19 portal

https://www.ebi.ac.uk/covid-19

Miso question answering literture search

https://covid19.askmiso.com

BERT base model finetuned on CORD-19 data

https://huggingface.co/deepset/covid_bert_base

COVID-19 embeddings

https://www.kaggle.com/jonathanbesomi/covid19-word-embeddings

https://www.kaggle.com/jonathanbesomi/cord-19-embeddings-from-abstracts-with-spacy

https://www.kaggle.com/fmitchell259/creating-a-doc2vec-model

https://tfhub.dev/tensorflow/cord-19/swivel-128d/2

https://www.kaggle.com/allen-institute-for-ai/CORD-19-research-challenge/discussion/138159

https://www.kaggle.com/allen-institute-for-ai/CORD-19-research-challenge/discussion/138050

CORD-19 annotations

https://www.kaggle.com/allen-institute-for-ai/CORD-19-research-challenge/discussion/138219

https://github.com/fhircat/CORD-19-on-FHIR

List of tools

https://www.kaggle.com/allen-institute-for-ai/CORD-19-research-challenge/discussion/137256

https://docs.google.com/spreadsheets/d/13vO8jZ4mrYD1U86U8r1qolY2HV552D7e5Fmko3c6Vrg/edit#gid=0

Notebooks

quick setup and downloading the COVID-19 dataset (by Aymeric Alixe)

https://colab.research.google.com/drive/1Qw74IpbvO105J2fTExqKURnrZuT0NW7X

scispacy BioNER

https://github.com/nasa-jpl-cord-19/Biomolecular-Named-Entities/blob/master/SciSpacy%20NER.ipynb

Coronavirus Tech Handbook

https://coronavirustechhandbook.com/home

mobility data

https://www.apple.com/covid19/mobility

genomic data

Nextstain.org visualization tool

https://nextstrain.org/ncov

https://www.gisaid.org

Graphen genomic data

http://www.graphen.ai/covid.html

http://www.graphen.ai/covid/types.html

https://artic.network/hCoV-19-viz

clinical data and patient registries

COVID-19 chest CT and x-rays

https://github.com/ieee8023/covid-chestxray-dataset/blob/master/README.md?fbclid=IwAR30yTGBr55WXdCngCoICDENHycmdL2bGwlvl1ckdZM-ucjGH10Uakz7khk

Stanford data on clinical notes

https://medium.com/@nigam/an-ehr-derived-summary-of-the-presenting-symptoms-of-patients-screened-for-sars-cov-2-910ceb1b22b9

https://docs.google.com/spreadsheets/d/1iZZvbv94fpZdC6XaiPosiniMOh18etSPliAXVlLLr1w/edit#gid=344371264

ASH RC COVID-19 Registry

https://www.ashresearchcollaborative.org/s/covid-19-registry-data-summaries

COVID-19 Registry for Hematology

COVID-Hep.net

https://covid-hep.net

Coronavirus (COVID-19) in liver disease reporting registry

ELSO registry

https://www.elso.org/Registry/FullCOVID19RegistryDashboard.aspx

COVID-19 patients on ECMO

EUROELSO

https://www.euroelso.net/covid-19/covid-19-survey

ECMO use in adult COVID-19 patients in Europe

LEOSS register

https://leoss.net

IntubateCOVID

https://www.intubatecovid.org/dashboards

COVID-10 Intubation registry

Pediatric COVID-19 U.S. Registry

https://www.pedscovid19registry.com/current-data.html

PSOProtect

https://psoprotect.org/current-data

Psoriasis Registry for Outcomes, Therapy and Epidemiology of COVID-19 Infection

SECURE-Cirrhosis

https://covidcirrhosis.web.unc.edu/updates-and-data

Reporting Registry for COVID-19 in liver disease

SECURE-IBD

https://covidibd.org/current-data

COVID-19 and Inflammatory Bowel Disease (IBD) Reporting Registry

SECURE-SCD

https://covidsicklecell.org/updates-data

COVID-19 and Sickle Cell Disease Registry

The COVID-19 Global Rheumatology Alliance Global Registry

https://rheum-covid.org/updates/combined-data.html

Registers with data provided by providers and patients

VIRUS COVID-19 Registry

https://sccmcovid19.org

Register of current ICU and hospital care patients

symptom tracker websites, fitness bands and apps for self-reporting

COVID19 Symptom Study (Swedish self-reporting app from Lund and Uppsala Universities)

https://csss-resultat.shinyapps.io/csss_dashboard

https://barrel.ai/covid19_symptoms_tracker

https://corona.sll.se

https://www.coronaviruscensuscollective.org

https://quantifiedflu.org

Link lists to many resources

https://dataverse.harvard.edu/dataverse/covid19

https://www.who.int/emergencies/diseases/novel-coronavirus-2019/global-research-on-novel-coronavirus-2019-ncov

https://github.com/virtual-biohackathons/covid-19-bh20/blob/master/datasets_and_tools.md

https://discourse.data-against-covid.org/t/community-wiki-resources-on-data-science-and-friends-vs-covid-19/731

https://swelife.se/verktyg/covid-19

https://vgrblogg.se/utveckling/2020/03/31/covid19-resurser-for-dig-som-vill-hacka-krisen/

https://www.hackthecrisis.se/inspiration

http://open-source-covid-19.weileizeng.com/index

https://www.producthunt.com/@chrismessina/collections/coronavirus

hackathons and citizen science

https://euvsvirus.org

https://covid-global-hackathon.devpost.com/submissions

https://wirvsvirushackathon.org

https://www.youtube.com/channel/UCPv_kdljMHmt4kLNB7QGn0g

https://www.guaana.com/challenges/dSvc4QnSmsSvmDG5k/results/4fTtLGpD2CRytd9Gy

https://callforcode.org

https://covid.postera.ai/covid

https://accelerateestonia.ee/en/hack-the-crisis/?fbclid=IwAR3F_HzMfa-YF5ZpwbrCp6Yh6lmDGuH7JEH9Pcgzw7qTzlPGhGj9aaASnvg

https://garage48.org/hackthecrisis?fbclid=IwAR2cokE5K3QUbJxMFriaY6KhUwRXde8wR-8LwrCOXgLoSbwpjhXgc5ac3WA

https://github.com/virtual-biohackathons/covid-19-bh20

https://codevscovid19.devpost.com/submissions

http://eu-citizen.science/citizen-science-resources-related-to-the-covid19-pandemic

https://github.com/virtual-biohackathons/covid-19-bh20

structural biology

SARS-CoV2 structure predictions

https://deepmind.com/research/open-source/computational-predictions-of-protein-structures-associated-with-COVID-19

systems biology, proteomics, drug targets

https://covid.pages.uni.lu

https://www.nature.com/articles/s41586-020-2286-9

https://www.biorxiv.org/content/10.1101/2020.03.22.002386v3

https://www.researchsquare.com/article/rs-17218/v1

https://www.covid19cellatlas.org

https://covid.barabasilab.com/2020/04/network-based-embedding-of-all-human.html

https://www.nature.com/articles/s41586-020-2286-9

3D printing

http://3dskane.se/doku.php

https://3dprintingindustry.com/news/3d-printing-community-responds-to-covid-19-and-coronavirus-resources-169143

discussion groups and platforms connecting researchers and volunteers

https://www.coronawhy.org

https://trello.com/b/y4odX7yZ/covid-19-global-team

https://discourse.data-against-covid.org

https://groups.google.com/forum/#!forum/virtual-biohackathon

https://crowdfightcovid19.org

https://www.facebook.com/groups/494650038080423/about

https://forum.scilifelab.se

videos

https://ellis.eu/covid-19

research funding and infrastructure support

https://coronavirus.frontiersin.org/covid-19-research-funding-monitor

https://www.xsede.org/covid19-hpc-consortium

https://prace-ri.eu

COVID-19 AI articles

https://www.nature.com/articles/s41591-020-0931-3

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